BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030F11SP1|AL429263
(998 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig582 1885 0.0
3x_Contig1088 147 3e-35
3x_Contig727 147 3e-35
3x_Contig1376 145 1e-34
3x_Contig1747 143 5e-34
3x_Contig1718 143 5e-34
3x_Contig1204 143 5e-34
3x_Contig631 143 5e-34
>3x_Contig582
Length = 2827
Score = 1885 bits (947), Expect = 0.0
Identities = 988/1001 (98%), Gaps = 3/1001 (0%)
Strand = Plus / Plus
Query: 1 gatctcttgamagacccaaagaattgcatcataggtgccagccagagatgcaccactgtg 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1084 gatctcttgaaagacccaaagaattgcatcataggtgccagccagagatgcaccactgtg 1143
Query: 61 cacattcaaaaatctcaccatcgatgttgatcaaccaaagtaatcagtcttcaaactcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1144 cacattcaaaaatctcaccatcgatgttgatcaaccaaagtaatcagtcttcaaactcat 1203
Query: 121 tgacccacatgtatgcmgatcaccatgagagagaattagaggattctcaaacaaccaagc 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1204 tgacccacatgtatgcagatcaccatgagagagaattagaggattctcaaacaaccaagc 1263
Query: 181 acgctggacgacctttccttgcgaaatcgacttcaacgagcgccttgaaaaatactgcat 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1264 acgctggacgacctttccttgcgaaatcgacttcaacgagcgcattgaaaaatactgcat 1323
Query: 241 caaagcattttgggtttagtatgacgccgctgtctcacatagcaaggtctgctactccac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1324 caaagcattttgggtttagtatgacgccgctgtctcacatagcaaggtctgctactccac 1383
Query: 301 ctgcaaaattctccccactttcaaattcgtcaaatggaattcagacgccgaaagctgtct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1384 ctgcaaaattctccccactttcaaattcgtcaaatggaattcagacgccgaaagctgtct 1443
Query: 361 caaacagaaataaagtgacttctggrtcgaataaacatcagtcctttggcagttttacag 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1444 caaacagaaataaagtgacttctggatcgaataaacatcagtcctttggcagttttacag 1503
Query: 421 gtatcctccataagaaggatatagataatgaacagtaattaatgatataaatcttgtaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1504 gtatcctccataagaaggatatagataatgaacagtaattaatgatataaatcttgtaac 1563
Query: 481 ttagaagcggcgctttgatctagctgtacttccatatgctttgtgcttgtcgaaacgggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1564 ttagaagcggcgctttgatctagctgtacttccatatgctttgtgcttgtcgaaacgggt 1623
Query: 541 tataagatagthagccaacgataaaagtttaaagtgaaacttgatgcaaactgcatttat 600
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1624 tataagatagtaagccaacgataaaagtttaaagtgaaacttgatgcaaactgcatttat 1683
Query: 601 tggacgtgcaattcttttcgttacaaagcgtccgcgatagtttaatggttagaattcgcg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1684 tggacgtgcaattcttttcgttacaaagcgtccgcgatagtttaatggttagaattcgcg 1743
Query: 661 cttgtcgcgtgcgagatcggggttcaattccccgtcgcggaggactagcttttttaatct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1744 cttgtcgcgtgcgagatcggggttcaattccccgtcgcggaggactagcttttttaatct 1803
Query: 721 catcacatagtcaagccaccttactgagataccatatagaagaagcacacaaagagctag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1804 catcacatagtcaagccaccttactgagataccatatagaagaagcacacaaagagctag 1863
Query: 781 attagatcaaccgcttcctttagtcaatacgccatttgacataactgtgaagtcaagtgc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1864 attagatcaaccgcttcctttagtcaatacgccatttgacataactgtgaagtcaagtgc 1923
Query: 841 aaracaaaatattctttttaccattcgaactgtcatcgtttattattatttgtgtatttt 900
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1924 aacgacaaatattctttttaccattcgaactgtcatcgtttattattatttgtgtatttt 1983
Query: 901 aacttagttccagctaatgtacataccgttatataggacgccggtaggtaggg-aaacac 959
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1984 aacttagttccagctaatgtacataccgttatataggacgccggtaggtagggaaaacac 2043
Query: 960 cagtctcttgttgattgagt-atgtt-cmcatcgtggttcc 998
|||||||||||||||||||| ||||| | ||||||||||||
Sbjct: 2044 cagtctcttgttgattgagtaatgttccacatcgtggttcc 2084
>3x_Contig1088
Length = 4585
Score = 147 bits (74), Expect = 3e-35
Identities = 74/74 (100%)
Strand = Plus / Plus
Query: 629 cgtccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaat 688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1438 cgtccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaat 1497
Query: 689 tccccgtcgcggag 702
||||||||||||||
Sbjct: 1498 tccccgtcgcggag 1511
>3x_Contig727
Length = 2486
Score = 147 bits (74), Expect = 3e-35
Identities = 74/74 (100%)
Strand = Plus / Minus
Query: 631 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1173 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 1114
Query: 691 cccgtcgcggagga 704
||||||||||||||
Sbjct: 1113 cccgtcgcggagga 1100
>3x_Contig1376
Length = 7449
Score = 145 bits (73), Expect = 1e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 630 gtccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaatt 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6410 gtccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaatt 6469
Query: 690 ccccgtcgcggag 702
|||||||||||||
Sbjct: 6470 ccccgtcgcggag 6482
>3x_Contig1747
Length = 15671
Score = 143 bits (72), Expect = 5e-34
Identities = 72/72 (100%)
Strand = Plus / Minus
Query: 631 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2462 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 2403
Query: 691 cccgtcgcggag 702
||||||||||||
Sbjct: 2402 cccgtcgcggag 2391
>3x_Contig1718
Length = 19496
Score = 143 bits (72), Expect = 5e-34
Identities = 72/72 (100%)
Strand = Plus / Minus
Query: 631 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4332 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 4273
Query: 691 cccgtcgcggag 702
||||||||||||
Sbjct: 4272 cccgtcgcggag 4261
>3x_Contig1204
Length = 5869
Score = 143 bits (72), Expect = 5e-34
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 631 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5718 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 5777
Query: 691 cccgtcgcggag 702
||||||||||||
Sbjct: 5778 cccgtcgcggag 5789
>3x_Contig631
Length = 2339
Score = 143 bits (72), Expect = 5e-34
Identities = 72/72 (100%)
Strand = Plus / Minus
Query: 631 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 690
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 tccgcgatagtttaatggttagaattcgcgcttgtcgcgtgcgagatcggggttcaattc 1021
Query: 691 cccgtcgcggag 702
||||||||||||
Sbjct: 1020 cccgtcgcggag 1009
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6531
Number of Sequences: 1807
Number of extensions: 6531
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 8
length of query: 998
length of database: 10,358,551
effective HSP length: 16
effective length of query: 982
effective length of database: 10,329,639
effective search space: 10143705498
effective search space used: 10143705498
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)